Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs151173804 chr17:80817328 G/A 5.67E-9 288 26.37 24.15 16.4 KM Plot
KIRP rs151335816 chr2:40464573 T/C 1.89E-5 276 11.4 22.37 27.73 KM Plot
KIRP rs153374 chr5:65424875 A/G 0.000112 289 9.77 20.72 27.13 KM Plot
KIRP rs153387 chr5:65422236 G/A 0.000163 285 26.4 22.57 10.23 KM Plot
KIRP rs153388 chr5:65422308 G/T 0.000138 282 26.67 22.07 10.23 KM Plot
KIRP rs1553316 chr5:156479509 A/G 0.0002 289 12.78 23.23 26.37 KM Plot
KIRP rs1553317 chr5:156479424 A/C 4.92E-6 288 12.1 24.02 26.37 KM Plot
KIRP rs1553319 chr5:156479001 T/A 1.52E-7 286 12.78 22.57 26.37 KM Plot
KIRP rs1557830 chr17:30156008 C/T 3.96E-5 287 18.38 25.02 25.7 KM Plot
KIRP rs1563227 chr3:16011014 C/T 6.09E-5 286 21.63 26.28 25.6 KM Plot
KIRP rs156803 chr15:39556231 T/C 0 277 25.57 28.57 4.63 KM Plot
KIRP rs1568077 chr10:125320934 C/A 2.91E-5 279 25.63 27.02 9.9 KM Plot
KIRP rs1581776 chr9:123339130 G/C 1.14E-7 288 26.2 21.37 15.75 KM Plot
KIRP rs1609034 chr19:24505637 C/T 1.86E-5 289 11.43 34.3 25.57 KM Plot
KIRP rs1657250 chr7:154937957 C/A 0.000181 278 20.9 27.13 26.4 KM Plot